Publications

The following is a list of manuscripts and conference presentations from ChARM Lab. There are 17 published and 6 in-preparation manuscripts in addition to 21 conference presentations.

2019 Published Manuscripts:

Pearce JM, Khaksari M, Denkenberger D, “Preliminary Automated Determination of Edibility of Alternative Foods: Non-Targeted Screening for Toxins in Red Maple Leaf Concentrate”. Plants. 2019, 8 (5) 110. DOI.org/10.3390/plants8050110

2018 Published Manuscripts:

Shahsavari S, McNamara C, Sylvester M, Bromley E, Joslin S, Lu B-Y, Fang S, “Amine Protecting Groups Deprotectable under Nearly Neutral Oxidative Conditions”. Beilstein Journal of Organic Chemistry 2018, 14, 1750-1757.DOI:10.3762/bjoc.14.149

Eriyagama D, Shahsavari S, Halami B, Lu B-Y, Wei F and Fang S, “High Throughput, Large Scale and Long Synthetic Oligodeoxynucleotide Purification Using the Catching Full-Length Sequence by Polymerization Technology”. Organic Process Research and Development 2018, 22, 1282-1288. DOI10.1021/acs.oprd.8b00209

Halami B, Shahsavari S, Nelson Z, Prehoda L, Eriyagama D, and Fang S, “Incorporation of Sensitive Ester and Chloropurine Groups into Oligodeoxynucleotides Through Solid Phase Synthesis”. ChemistrySelect 2018, 3, 8857-8862. DOI.org/10.1002/slct.201801484

Khaksari M, Mazzoleni LR, Ruan C, Song P, Hershey ND, Kennedy RT, Burns MA, Minerick AR, “Detection and Quantification of Vitamins in Microliter Volumes of Biological Samples by LC-MS for Clinical Screening”. AIChE J. Accepted Author Manuscript. DOI:10.1002/aic.16345

Varanasi L, Coscarelli E, Khaksari M, Mazzoleni LR, Minakata D, “Transformations of Dissolved Organic Matter Induced by UV Photolysis, Hydroxyl Radicals, Chlorine Radicals, and Sulfate Radicals in Aqueous-Phase UV-Based Advanced Oxidation Processes”. Journal of Water Research, 135 (2018) 22-30. DOI:org/10.1016/j.watres.2018.02.015

Xia S, Wang J, Bi J, Wang X, Fang M, Philips T, May A, Conner N, Tanasova M, Luo F-T, Liu H, “Fluorescent probes based on π-conjugation modulation between hemicyanine and coumarin moieties for ratiometric detection of pH changes in live cells with visible and near-infrared channels”. Journal of Sensors & Actuators: B. Chemical, 265(2018) 699-708. DOI.org/10.1016/j.snb.2018.02.168

Shahsavari S, Gooding J, Wigstrom T, Fang S, “dM-Dim for Carboxylic Acid Protection”. Tetrahedron Letters, 59 (2018) 1763-1766. DOI:org/10.1016/j.tetlet.2018.03.076

Begoyan V, Xia S, Khanan, S, Ferrier A, Rao S, Tanasova M, “Multicolor GLUT5-Permeable Fluorescent Probes for Fructose Transport Analysis”. Chem. Commun., 2018, 54, 3855-3858. DOI:10.1039/C7CC09809J

Kannan S, Begoyan V, Fedie J, Xia S, Weseliński L, Tanasova M, Rao S, “Metabolism-driven High Throughput Cancer Identification with GLUT5-specific Molecular Probes”. Biosensors, 2018, e39. DOI:10.3390/bios8020039

Singh S, Begoyan V, Tanasova M, Waters K, Seel M, Pandey R, “Coumarins: Spectroscopic measurements and first principles calculations of C4‐substituted 7‐aminocoumarins”. J. Phys. Org. Chem. 2018, e3852. DOI:org/10.1002/poc.3852

Ainsley S, Chaturvedi SS, Karabencheva-Christova TG, Tanasova M, Christov CZ, “Integrating Molecular Probes and Molecular Dynamics to Reveal Binding Interactions towards Designing GLUT5 Inhibitors”. Chem. Commun. 2018, 9917 9920. DOI: 10.1039/c8cc04843f

2017 Published Manuscripts:

Fang M, Adhikari R, Bi J, Mazi W, Dorh N, Wang J, Conner N, Ainsley J, Karabencheva-Christova TG, Luo FT, Tiwari A, Liu H, “Fluorescent Probes for Sensitive and Selective Detection of pH Changes in Live Cells in Visible and Near-infrared Channels”. Journal of Materials Chemistry B, 5 (2017) 9579-9590. DOI:10.1039/c7tb02583a

Shahsavari S, Gooding J, Wigstrom T, Fang S, “Formation of Hindered Arylcarbamates using Alkyl Aryl Carbonates under Highly Reactive Conditions”. Journal of ChemistrySelect, 2 (2017) 3959-3963. DOI:10.1002/slct.201700364

Khanal A, Fang S, “Solid Phase Stepwise Synthesis of Polyethylene Glycol”, Chemistry – A European Journal. 23 (2017) 1533-1542. DOI:10.1002/chem.201703004

Weseliński ŁJ, Begoyan V, Xia S, Ferrier A, Tanasova M, “Tuning Cross-Coupling Approaches for Modification of Highly-functionalized Heterocycles”. Journal of ACS Omega, 2 (2017) 7002-7015. DOI:10.1021/acsomega.7b01159

Khaksari M, Mazzoleni LR, Ruan C, Kennedy RT, Minerick AR, “Determination of Water-Soluble and Fat Soluble Vitamins in Tears and Blood Serum of Infants and Parents by Liquid Chromatography/Mass Spectrometry”. Experimental Eye Research, 155 (2017) 54-63. DOI:10.1016/j.exer.2016.12.007

Khaksari M, Mazzoleni LR, Ruan C, Kennedy RT, Minerick AR, “Data representing two separate LC-MS methods for detection and quantification of water-soluble and fat-soluble vitamins in tears and blood serum”. Data in Brief, 11 (2017) 316-330. DOI:10.1016/j.dib.2017.02.033

In Preparation Manuscripts:

Varanasi L, Coscarelli E, Khaksari M, Mazzoleni LR, Minakata D, “Transformations of Effluent Dissolved Organic Matter in Aqueous-Phase UV-Based Advanced Oxidation Processes”, in preparation to be submitted to Environmental Science Water Research and Technology, 2019

Varanasi L, Coscarelli E, Khaksari M, Mazzoleni LR, Minakata D, “Comparison of Wastewater and Lake Water Dissolved Organic Matter”, in preparation to be submitted tothe Journal of Water Research, 2019

Kirillova EN, Samburova V, Bhattarai C, Sengupta D, Moosmüller H, Khlystov A, Mazzoleni LR, “Molecular Characterization of Water-Soluble Organic Carbon (WSOC) from Biomass Burning Aerosol using Ultrahigh Resolution Orbitrap Elite Mass Spectrometry”. in preparation to be submitted to the Journal of Environmental Science and Technology, 2018.

Song Z, Khaksari M, Lilleskov EA, Kane ES, and Doskey PV, “Molecular biogeochemistry of a poor fen. I. Dissolved organic matter in porewater”. Biogeochemistry, in preparation, 2019.

Song Z, Khaksari M, Lilleskov EA, Kane ES, and Doskey PV, “Molecular biogeochemistry of a poor fen. II. Dissolved nitrogen species in porewater”. Biogeochemistry, in preparation, 2019.

Song Z, Khaksari M, Lilleskov EA, Kane ES, and Doskey PV, “Molecular biogeochemistry of a poor fen. III. Water-extractable organic matter in peat”. Biogeochemistry, in preparation, 2019.

Conference Presentations:

Joshi PU, Kriz S, Schroeder M, Heldt CL, “Determination of Binodal Curves and Tie Lines for Aqueous Two-Phase Systems with Osmolytes for Bioseparations”. American Institute of Chemical Engineers Annual Meeting, Pittsburg, PA, October, 2018. (Poster)

Begoyan VV, Weselinski LJ; Tanasova M, “Unveiling the conformational preferences of fructose transporters”. 255-th ACS Meeting, New Orleans, LA, USA, March 18-22, 2018.

Ferrier A, Begoyan VV, Tanasova M, “Development of Fluorogenic Probes for Sugar Transport Analysis”. 255-th ACS Meeting (Sci-Mix), New Orleans, LA, USA, March 18-22, 2018.

Varanasi L, Coscarelli E, Khaksari M, Mazzoleni L, Minakata D, “Transformation of dissolved organic matter in UV-based advanced oxidation processes”. ACS National Meeting, New Orleans, LA, March 18-22, 2018.

Schum S, Rose E, Khaksari M, Kirillova E, Samburova E, Mazzoleni LR, “More Comprehensive Molecular Characterization of Organic Aerosol using Ultrahigh Resolution Orbitrap Elite Mass Spectrometry with ESI, APCI, and APPI”. Upper Peninsula American Chemical Society Regional Poster Session, Marquette, MI, April 14, 2018. (Poster)

Rose E, Khaksari M, Leverton T, Schum S, Brege M, and Mazzoleni LR, “Evaluation of Negative Ion Electrospray Ionization Aggregation Artifacts using Ultrahigh Resolution Mass Spectrometry”. Upper Peninsula ACS Student Research Symposium, Marquette, MI, April 2018 (Poster)

Brege M, Khaksari M, Leverton T, and Mazzoleni LR, “Detection of 20,000 molecular formulas in Suwanee River fulvic acid coupling liquid chromatography to Orbitrap Elite mass spectrometry with electrospray ionization”. Upper Peninsula ACS Student Research Symposium, Marquette, MI, April 2018 (Poster)

Kirillova EN,Samburova V, Bhattarai C, Sengupta D, Moosmüller H, Khlystov A, andMazzoleni LR, “MolecularCharacterizationofWater-SolubleOrganicCarbon(WSOC) fromBiomassBurningofWildlandFuelsUsingUltrahighResolutionOrbitrapEliteMassSpectrometry”, AmericanAssociationofAerosolResearchAnnualConference, RaleighNC, October 2017.

Varanasi L, CoscarelliE, Perram D, Khaksari M, Mazzoleni LR, Minakata D, “Transformationof dissolved organic matter in engineered ultraviolet (UV) photolysis and UV-based advanced oxidation processes”. Association of Environmental Engineering and Science Professors (AEESP), University of Michigan, Ann Arbor, MI, June 2017.

Kirillova EN, Samburova V, Bhattarai C, Sengupta D, Moosmüller H, Khlystov A, Mazzoleni LR, “Molecular Characterization of Water-Soluble Organic Carbon (WSOC) from Biomass Burning Aerosol using Ultrahigh Resolution Orbitrap Elite Mass Spectrometry”. American Society for Mass Spectrometry (ASMS) Annual Conference, Indianapolis, IN, June 2017. (Poster)

Khaksari M, Auer M, Kuczynski A, Mazzoleni LR, “Non-Targeted Screening of More than 600 Ethoxylated Homologs and Their Transformation Products in Water Samples Using High Resolution-Mass Spectrometry”. ASMS Annual Conference, Indianapolis, IN, June 2017. (Poster)

Xia S, Begoyan V, Tanasova M, “Multicolor Probes for Analysis of Carbohydrate Transport Activity”. 253-rd ACS Meeting, San Francisco, CA, April 2017.

Fedie JR, Xia S, Tanasova M, “Fluorescent Probes for Targeting Fructose Transport”. 253-rd ACS Meeting, San Francisco, CA, April 2017.

Varanasi L, Coscarelli E, Perram D, Khaksari M, Mazzoleni LR, Minakata D, “Transformation of Dissolved Organic Matter in Engineered Ultraviolet (UV) Photolysis and UV-based Advanced Oxidation Processes”. World Water Day, Michigan Technological University, Houghton, MI, March 2017.

Varanasi L, Coscarelli E, Khaksari M, Mazzoleni LR, Minakata D, “Transformation of Dissolved Organic Matter in Engineered Ultraviolet (UV) Photolysis and UV-based Advanced Oxidation Processes”. ACS Upper Peninsula Student Research Symposium, Marquette, MI, March 2017.

Coscarelli E, Varanasi L, Khaksari M, Mazzoleni LR, Minakata D, “Impact of Dissolved Organic Matter and its Transformation to Ultraviolet Photolysis Process in Engineered Water and Wastewater Treatment Systems”. Undergraduate Research Symposium, Michigan Technological University, Houghton, MI, March 2017. (Poster)

Ferrier A, Weselinski LJ, Tanasova M, “Synthesis of a Fructopyranose Mimic as a Carbohydrate Probe for Fructose Transporters”.ACS Upper Peninsula Student Research Symposium, Marquette, March 2017.

Xia S, Begoyan V, Tanasova M, “Multicolor Probes for Analysis of Carbohydrate Transport Activity”. ACS Upper Peninsula Student Research Symposium, Marquette, March 2017.

Begoyan VV, Tanasova M, “Cleavable fluorescent probes for direct measurement of nutrient uptake”, Abstracts of papers of the American Chemical Society, Volume: 25, Meeting Abstract: 507, Published: April 2017.

Varanasi, L.; Coscarelli, E.; Perram, D.; Khaksari, M.; Mazzoleni, L.; Minakata, D. Transformation of dissolved organic matter in engineered ultraviolet (UV) photolysis and UV-based advanced oxidation processes. Michigan Tech Environmental Engineering Graduate seminar, Houghton, MI, September 2017.

Varanasi, L.; Coscarelli, E.; Khaksari, M.; Mazzoleni, L.; Minakata, D. Transformation of dissolved organic matter in UV-based advanced oxidation processes. ACS National Meeting, New Orleans. L.A, March 2018.